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	<title>Comments on: Chocolate Cake Electrophoresis</title>
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	<link>http://www.americanbiotechnologist.com/blog/chocolate-cake-electrophoresis/</link>
	<description>Advancing the productivity of American Biotechnologists</description>
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		<title>By: American Biotechnologist</title>
		<link>http://www.americanbiotechnologist.com/blog/chocolate-cake-electrophoresis/comment-page-1/#comment-20186</link>
		<dc:creator>American Biotechnologist</dc:creator>
		<pubDate>Wed, 01 Aug 2012 20:30:59 +0000</pubDate>
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		<description>We received the following comment via email from a fellow reader who agreed to have his comment posted anonymously:


My observation is that stacking gel is still about 4% acrylamide (typically), and you could separate proteins with the right equipment using only the 4% in theory. The reason things &quot;stack&quot; is that the relative rate of the small proteins in a 10-20% acrylamide matrix is less than (ish?) that of the largest protein rate moving through the 4% portion. Once the largest catch up, they move slower also, and separation begins. I suppose the quality of stacking depends on how different you can make your matrices, although I&#039;ve found it hard to make less than a 4% gel that holds its form. 

In the video, their pictorial of proteins migrating in the stacking gel shows the smallest proteins stationary in the middle of the stacking phase, and only moving as the larger ones reach them, when in fact they all move as described above.</description>
		<content:encoded><![CDATA[<p>We received the following comment via email from a fellow reader who agreed to have his comment posted anonymously:</p>
<p>My observation is that stacking gel is still about 4% acrylamide (typically), and you could separate proteins with the right equipment using only the 4% in theory. The reason things &#8220;stack&#8221; is that the relative rate of the small proteins in a 10-20% acrylamide matrix is less than (ish?) that of the largest protein rate moving through the 4% portion. Once the largest catch up, they move slower also, and separation begins. I suppose the quality of stacking depends on how different you can make your matrices, although I&#8217;ve found it hard to make less than a 4% gel that holds its form. </p>
<p>In the video, their pictorial of proteins migrating in the stacking gel shows the smallest proteins stationary in the middle of the stacking phase, and only moving as the larger ones reach them, when in fact they all move as described above.</p>
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		<title>By: Dianne Purves</title>
		<link>http://www.americanbiotechnologist.com/blog/chocolate-cake-electrophoresis/comment-page-1/#comment-19868</link>
		<dc:creator>Dianne Purves</dc:creator>
		<pubDate>Tue, 24 Jul 2012 03:46:25 +0000</pubDate>
		<guid isPermaLink="false">http://www.americanbiotechnologist.com/blog/?p=4440#comment-19868</guid>
		<description>Great analogy! Students always perk up at the mention of chocolate. I wish I had one just like this for DNA gel electrophoresis for my freshman level students!</description>
		<content:encoded><![CDATA[<p>Great analogy! Students always perk up at the mention of chocolate. I wish I had one just like this for DNA gel electrophoresis for my freshman level students!</p>
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		<title>By: American Biotechnologist</title>
		<link>http://www.americanbiotechnologist.com/blog/chocolate-cake-electrophoresis/comment-page-1/#comment-19748</link>
		<dc:creator>American Biotechnologist</dc:creator>
		<pubDate>Thu, 19 Jul 2012 20:49:20 +0000</pubDate>
		<guid isPermaLink="false">http://www.americanbiotechnologist.com/blog/?p=4440#comment-19748</guid>
		<description>Thanks for the positive feedback!</description>
		<content:encoded><![CDATA[<p>Thanks for the positive feedback!</p>
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	<item>
		<title>By: Dr. Veronica Acosta</title>
		<link>http://www.americanbiotechnologist.com/blog/chocolate-cake-electrophoresis/comment-page-1/#comment-19522</link>
		<dc:creator>Dr. Veronica Acosta</dc:creator>
		<pubDate>Wed, 11 Jul 2012 14:46:32 +0000</pubDate>
		<guid isPermaLink="false">http://www.americanbiotechnologist.com/blog/?p=4440#comment-19522</guid>
		<description>This is awesome!  Love the analogies.  :)  Great job!</description>
		<content:encoded><![CDATA[<p>This is awesome!  Love the analogies.  <img src='http://www.americanbiotechnologist.com/blog/wp-includes/images/smilies/icon_smile.gif' alt=':)' class='wp-smiley' />   Great job!</p>
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